Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | MIZ03_1351 | A0A0U2UYC4 | - | 1365185 - 1366537 | 49613.2 |
| citrate lyase subunit beta-like protein | MIZ03_1352 | P9WPE0 | - | 1366561 - 1367382 | 29290.5 |
| acetyl-coa:oxalate coa-transferase | MIZ03_1353 | Q7CXU0 | - | 1367379 - 1368560 | 42521.7 |
| mesaconyl-c(4)-coa hydratase | MIZ03_1354 | A9WC41 | - | 1368570 - 1369415 | 31707.8 |
| c4-dicarboxylate trap transporter large permease protein dctm | MIZ03_1355 | O07838 | - | 1369483 - 1370766 | 45701.2 |
| c4-dicarboxylate trap transporter small permease protein dctq | MIZ03_1356 | O07837 | - | 1370769 - 1371428 | 24277.5 |
| c4-dicarboxylate-binding periplasmic protein dctp | MIZ03_1357 | P37735 | - | 1371514 - 1372545 | 36945.4 |
| hypothetical protein | MIZ03_1358 | Q04064 | - | 1372588 - 1373670 | 37335.9 |
| hypothetical protein | MIZ03_1359 | Not Available | - | 1373702 - 1373815 | 4185.31 |
| hth-type transcriptional regulator cynr | MIZ03_1360 | P52696 | + | 1373835 - 1374755 | 33900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
