Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | MIZ03_1341 | P00861 | + | 1352021 - 1353298 | 45387.6 |
| hypothetical protein | MIZ03_1342 | Not Available | + | 1353327 - 1354868 | 58741.1 |
| d-alanine aminotransferase | MIZ03_1343 | O29329 | - | 1355110 - 1356030 | 33853.4 |
| hypothetical protein | MIZ03_1344 | O53789 | + | 1356125 - 1356922 | 28180.0 |
| hypothetical protein | MIZ03_1345 | P37511 | - | 1356919 - 1357848 | 32531.9 |
| hth-type transcriptional regulator hdfr | MIZ03_1346 | O32255 | + | 1357924 - 1358799 | 31912.0 |
| hypothetical protein | MIZ03_1347 | Not Available | + | 1358912 - 1360351 | 52785.0 |
| hypothetical protein | MIZ03_1348 | P0AAV9 | - | 1360524 - 1362557 | 70777.3 |
| hypothetical protein | MIZ03_1349 | P37463 | - | 1362559 - 1363731 | 41679.9 |
| fumarate reductase flavoprotein subunit | MIZ03_1350 | Q9Z4P0 | - | 1363718 - 1365178 | 52766.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
