Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | MIZ03_1331 | P44038 | - | 1343579 - 1345396 | 66533.5 |
| hypothetical protein | MIZ03_1332 | Not Available | - | 1345393 - 1346607 | 46496.6 |
| hypothetical protein | MIZ03_1333 | Not Available | - | 1346597 - 1346740 | 5211.42 |
| trna(fmet)-specific endonuclease vapc | MIZ03_1334 | O06662 | - | 1346737 - 1347156 | 15613.7 |
| hypothetical protein | MIZ03_1335 | Q4UNB3 | - | 1347162 - 1347389 | 8489.15 |
| hypothetical protein | MIZ03_1336 | P55127 | + | 1347635 - 1348720 | 38535.7 |
| hypothetical protein | MIZ03_1337 | Not Available | - | 1348799 - 1349044 | 9228.16 |
| hypothetical protein | MIZ03_1338 | Not Available | + | 1349120 - 1349284 | 5968.35 |
| octopine catabolism/uptake operon regulatory protein occr | MIZ03_1339 | P03030 | - | 1349324 - 1350280 | 34121.7 |
| hypothetical protein | MIZ03_1340 | Not Available | - | 1350296 - 1351945 | 63044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
