Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase | MIZ03_1241 | Q02NB5 | + | 1245241 - 1246494 | 45745.2 |
| Trna-gly | Not Available | Not Available | + | 1246578 - 1246651 | Not Available |
| succinate-semialdehyde dehydrogenase | MIZ03_1243 | Q88RC0 | - | 1246785 - 1248263 | 52339.6 |
| guanidinobutyrase | MIZ03_1244 | Q9I3S3 | - | 1248346 - 1249302 | 34346.4 |
| inner membrane abc transporter permease protein ydcv | MIZ03_1245 | P45169 | - | 1249388 - 1250191 | 28915.2 |
| hypothetical protein | MIZ03_1246 | P31135 | - | 1250218 - 1251468 | 45448.4 |
| hypothetical protein | MIZ03_1247 | Q9I6R6 | - | 1251490 - 1252521 | 37434.6 |
| spermidine/putrescine import atp-binding protein pota | MIZ03_1248 | Q47T99 | - | 1252576 - 1253670 | 39784.1 |
| 5-aminovalerate aminotransferase davt | MIZ03_1249 | Q88RB9 | - | 1253751 - 1255043 | 45338.6 |
| histidinol-phosphate aminotransferase | MIZ03_1250 | Q796Q6 | + | 1255229 - 1256626 | 51665.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
