Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MIZ03_1061 | Not Available | + | 1066956 - 1067180 | 8504.52 |
| hypothetical protein | MIZ03_1062 | Not Available | - | 1067278 - 1067424 | 5417.59 |
| lysine 5,6-aminomutase alpha subunit | MIZ03_1063 | E3PRJ5 | + | 1067470 - 1069014 | 56139.4 |
| lysine 5,6-aminomutase beta subunit | MIZ03_1064 | E3PRJ4 | + | 1069017 - 1069772 | 27564.0 |
| 3-aminobutyryl-coa ammonia lyase | MIZ03_1065 | Q8RHX1 | + | 1069800 - 1070201 | 14128.1 |
| 3-keto-5-aminohexanoate cleavage enzyme | MIZ03_1066 | Q8RHX2 | + | 1070218 - 1071033 | 28418.3 |
| hypothetical protein | MIZ03_1067 | Not Available | - | 1071660 - 1071824 | 5610.9 |
| hypothetical protein | MIZ03_1068 | Not Available | + | 1072003 - 1072356 | 12405.0 |
| hypothetical protein | MIZ03_1069 | Not Available | + | 1072466 - 1072579 | 4033.88 |
| hypothetical protein | MIZ03_1070 | Not Available | + | 1072632 - 1072856 | 8225.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
