Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| toluene-4-monooxygenase system, hydroxylase component subunit gamma | MIZ03_1051 | Q00457 | - | 1055299 - 1055565 | 9804.82 |
| toluene-4-monooxygenase system, hydroxylase component subunit alpha | MIZ03_1052 | Q00456 | - | 1055608 - 1057113 | 57582.2 |
| catalase-peroxidase | MIZ03_1053 | A1K9V0 | + | 1057330 - 1059537 | 79676.6 |
| hypothetical protein | MIZ03_1054 | Not Available | - | 1059712 - 1060806 | 40037.8 |
| hypothetical protein | MIZ03_1055 | Not Available | + | 1060951 - 1062222 | 41815.3 |
| flavodoxin 2 | MIZ03_1056 | P00324 | - | 1062272 - 1062826 | 20230.4 |
| regulatory protein asnc | MIZ03_1057 | Q8U0P3 | - | 1063022 - 1063450 | 15378.8 |
| l-lysine 2,3-aminomutase | MIZ03_1058 | Q8RHX4 | + | 1063616 - 1064818 | 44940.8 |
| l-erythro-3,5-diaminohexanoate dehydrogenase | MIZ03_1059 | E3PRJ9 | + | 1064829 - 1065866 | 36273.8 |
| hypothetical protein | MIZ03_1060 | Not Available | + | 1065863 - 1066945 | 37714.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
