Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudonocardia abyssalis KRD168
Accession NumberJADQDK010000001.1
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | I4I81_03910 | A4FLX5 | + | 832631 - 833614 | 34808.8 |
| hypothetical protein | I4I81_03915 | Not Available | + | 833634 - 834458 | 27613.6 |
| penicillin-binding protein 2 | I4I81_03920 | A0R022 | + | 834458 - 836296 | 63835.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | I4I81_03925 | A0QF47 | + | 836794 - 838206 | 47475.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | I4I81_03930 | P0A5L5 | + | 838203 - 839603 | 46972.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | I4I81_03935 | A4FLW3 | + | 839600 - 840670 | 37981.2 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | I4I81_03940 | Q5YYY1 | + | 840735 - 842090 | 45360.2 |
| putative lipid ii flippase ftsw | I4I81_03945 | P63763 | + | 842087 - 843382 | 45542.7 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | I4I81_03950 | Q5YYX9 | + | 843379 - 844467 | 36535.5 |
| udp-n-acetylmuramate--l-alanine ligase | I4I81_03955 | A4FLV9 | + | 844541 - 845944 | 48376.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.