Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudonocardia abyssalis KRD168
Accession NumberJADQDK010000001.1
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | I4I81_28095 | A4FPJ3 | + | 5746321 - 5746926 | 23429.4 |
| dna-directed rna polymerase subunit alpha | I4I81_28100 | A4FPJ2 | + | 5747029 - 5748075 | 37586.6 |
| 50s ribosomal protein l17 | I4I81_28105 | A3PVL9 | + | 5748078 - 5748881 | 28513.0 |
| trna pseudouridine(38-40) synthase trua | I4I81_28110 | Q2JFE6 | + | 5748944 - 5749732 | 28091.4 |
| cytosine permease | I4I81_28115 | P94369 | + | 5749966 - 5751357 | 47139.9 |
| nucleoside deaminase | I4I81_28120 | P78594 | + | 5751366 - 5751797 | 15275.2 |
| isopenicillin n synthase family oxygenase | I4I81_28125 | Q15JG7 | + | 5751767 - 5752708 | 33398.4 |
| type vii secretion protein eccb | I4I81_28130 | P9WNR0 | + | 5752759 - 5754168 | 46627.7 |
| type vii secretion-associated serine protease mycosin | I4I81_28135 | I6YC58 | - | 5754181 - 5755503 | 42666.7 |
| type vii secretion integral membrane protein eccd | I4I81_28140 | P9WNQ0 | - | 5755521 - 5756882 | 42810.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.