Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_04460 | Not Available | - | 1123363 - 1123743 | 14489.6 |
| para family protein | IZT61_04465 | O83296 | - | 1123740 - 1124375 | 23870.4 |
| relaxase/mobilization nuclease domain-containing protein | IZT61_04470 | Not Available | - | 1124387 - 1125586 | 45255.2 |
| plasmid mobilization relaxosome protein mobc | IZT61_04475 | Not Available | - | 1125590 - 1125997 | 15336.8 |
| hypothetical protein | IZT61_04480 | Q1AVT6 | - | 1127143 - 1127721 | 20940.1 |
| hypothetical protein | IZT61_04485 | Not Available | + | 1127979 - 1128167 | 7258.62 |
| hypothetical protein | IZT61_04490 | Not Available | + | 1129030 - 1129254 | 8515.68 |
| hypothetical protein | IZT61_04495 | Not Available | + | 1129838 - 1130047 | 7588.34 |
| hypothetical protein | IZT61_04500 | Not Available | + | 1130976 - 1131212 | 8888.93 |
| rtec domain-containing protein | IZT61_04505 | Not Available | - | 1132157 - 1133059 | 35039.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.