Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tonb-dependent receptorIZT61_04260T2KPJ3+1085887 - 1089330127272.0
ragb/susd family nutrient uptake outer membrane proteinIZT61_04265T2KPM5+1089341 - 109088857247.0
hypothetical proteinIZT61_04270Q09296+1090953 - 109217946047.7
type ii toxin-antitoxin system vapc family toxinIZT61_04275Q1RHR2-1092766 - 109313414303.3
hypothetical proteinIZT61_04280Not Available-1093137 - 109343311277.7
sdr family oxidoreductaseIZT61_04285A0A221J5W8-1093638 - 109470540024.7
crp/fnr family transcriptional regulatorIZT61_04290P23619+1094877 - 109545822718.7
recombinase family proteinIZT61_04295P17867+1095906 - 109763967034.1
hipa n-terminal domain-containing proteinIZT61_04300Not Available-1098086 - 109849015878.0
hipa domain-containing proteinIZT61_04305Not Available-1098492 - 109950239360.4

Displaying genes 851 – 860 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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