Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 methyltransferase | IZT61_00360 | A6L2N4 | + | 74727 - 75566 | 31888.5 |
| peptidoglycan synthetase | IZT61_00365 | A4J2B2 | + | 75685 - 77037 | 50322.5 |
| helix-turn-helix transcriptional regulator | IZT61_00370 | P15017 | + | 77123 - 77443 | 11689.5 |
| gnat family n-acetyltransferase | IZT61_00375 | Q46840 | - | 77541 - 78659 | 43142.9 |
| hypothetical protein | IZT61_00380 | Not Available | - | 78729 - 78917 | 7326.96 |
| smc-scp complex subunit scpb | IZT61_00385 | Q97HF1 | - | 79005 - 79571 | 21616.7 |
| histidine kinase | IZT61_00390 | P94586 | - | 79825 - 82818 | 114371.0 |
| response regulator transcription factor | IZT61_00395 | Q81JL3 | - | 82808 - 83590 | 29495.4 |
| ferritin-like domain-containing protein | IZT61_00400 | Not Available | + | 83714 - 84442 | 25747.5 |
| ferritin-like domain-containing protein | IZT61_00405 | Not Available | + | 84462 - 85328 | 31016.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.