Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_03810 | Not Available | + | 952907 - 953125 | 7513.8 |
| hypothetical protein | IZT61_03815 | Not Available | + | 953329 - 953520 | 6563.75 |
| adenylosuccinate lyase | IZT61_03820 | Q54J34 | + | 953645 - 954991 | 50270.9 |
| nifu family protein | IZT61_03825 | Q9UMS0 | + | 955434 - 955985 | 20185.8 |
| inositol monophosphatase | IZT61_03830 | B4ED80 | - | 956101 - 956892 | 29930.9 |
| prolipoprotein diacylglyceryl transferase | IZT61_03835 | Q49VV9 | - | 956953 - 958101 | 42744.8 |
| hypothetical protein | IZT61_03840 | Not Available | - | 958499 - 958675 | 6264.55 |
| duf72 domain-containing protein | IZT61_03845 | O32135 | - | 958741 - 959505 | 29163.4 |
| hypothetical protein | IZT61_03850 | Not Available | - | 959631 - 959822 | 7204.6 |
| duf421 domain-containing protein | IZT61_03855 | P96696 | + | 960009 - 960497 | 18102.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.