Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-binding protein | IZT61_03660 | Q8KU07 | - | 919882 - 920745 | 31775.1 |
| hypothetical protein | IZT61_03665 | Not Available | - | 920896 - 921201 | 11842.9 |
| mosc domain-containing protein | IZT61_03670 | P75863 | + | 922167 - 922979 | 30167.0 |
| beta-lactamase family protein | IZT61_03675 | P9WLZ2 | - | 923455 - 924711 | 46538.1 |
| lysoplasmalogenase | IZT61_03680 | Q8N2M4 | - | 924763 - 925455 | 26113.2 |
| hypothetical protein | IZT61_03685 | Not Available | + | 926447 - 926797 | 12611.6 |
| phosphatase pap2 family protein | IZT61_03690 | O34349 | + | 927154 - 927798 | 24810.3 |
| had family phosphatase | IZT61_03695 | P44004 | + | 927887 - 928552 | 24529.3 |
| galactose mutarotase | IZT61_03700 | P05149 | - | 928912 - 930084 | 42820.4 |
| l-glyceraldehyde 3-phosphate reductase | IZT61_03705 | Q8X529 | + | 930265 - 931254 | 36669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.