Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_02610 | Not Available | - | 624575 - 624946 | 13541.9 |
| penicillin-binding protein 1c | IZT61_02615 | P76577 | + | 625111 - 627492 | 88637.7 |
| hypothetical protein | IZT61_02620 | Not Available | - | 627558 - 628199 | 24192.2 |
| hypothetical protein | IZT61_02625 | Not Available | - | 629989 - 630222 | 8613.29 |
| fusc family protein | IZT61_02630 | P75870 | - | 630782 - 632869 | 77774.6 |
| ai-2e family transporter | IZT61_02635 | O34472 | + | 633393 - 634517 | 41736.2 |
| ytxh domain-containing protein | IZT61_02640 | Not Available | + | 634636 - 634836 | 7282.77 |
| arginine--trna ligase | IZT61_02645 | A6LHY5 | - | 634982 - 636754 | 66812.1 |
| amidinotransferase | IZT61_02650 | P41142 | + | 637012 - 638457 | 54711.4 |
| amidinotransferase | IZT61_02655 | Not Available | + | 638585 - 639496 | 34157.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.