Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | IZT61_02460 | A0Q140 | + | 593885 - 594526 | 24713.4 |
| sterol desaturase family protein | IZT61_02465 | O48916 | - | 594543 - 595226 | 27079.9 |
| coa transferase subunit b | IZT61_02470 | P63651 | - | 595632 - 596294 | 23400.9 |
| coa transferase subunit a | IZT61_02475 | P42315 | - | 596499 - 597194 | 25140.3 |
| pqq-dependent sugar dehydrogenase | IZT61_02480 | P73001 | - | 597493 - 598584 | 39361.9 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | IZT61_02485 | P77489 | - | 599031 - 601268 | 81405.8 |
| xanthine dehydrogenase family protein subunit m | IZT61_02490 | P77324 | - | 601280 - 602293 | 36667.9 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | IZT61_02495 | Q8X6I9 | - | 602286 - 602798 | 18588.3 |
| hypothetical protein | IZT61_02500 | Not Available | - | 602926 - 605130 | 83386.9 |
| hypothetical protein | IZT61_02505 | Not Available | + | 605269 - 605424 | 5936.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.