Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5103 domain-containing protein | IZT61_22065 | Not Available | - | 5403926 - 5405203 | 49268.6 |
| abc-f family atp-binding cassette domain-containing protein | IZT61_22070 | O05519 | - | 5405461 - 5407368 | 71841.7 |
| rrf2 family transcriptional regulator | IZT61_22075 | P71036 | + | 5407686 - 5408096 | 14881.9 |
| nad(p)h-binding protein | IZT61_22080 | P71037 | + | 5408272 - 5408922 | 23413.8 |
| quinone-dependent dihydroorotate dehydrogenase | IZT61_22085 | A0M4D0 | + | 5409029 - 5410060 | 38110.3 |
| aspartate aminotransferase family protein | IZT61_22090 | P94427 | + | 5410313 - 5411617 | 46606.4 |
| carbon-nitrogen hydrolase family protein | IZT61_22095 | Q497B0 | + | 5411740 - 5412654 | 34197.4 |
| hypothetical protein | IZT61_22100 | Not Available | + | 5412879 - 5413082 | 7856.21 |
| dna-binding protein | IZT61_22105 | Not Available | + | 5413079 - 5413522 | 16911.0 |
| voc family protein | IZT61_22110 | Not Available | + | 5413829 - 5414239 | 15183.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.