Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster binding domain-containing protein | IZT61_21515 | P44428 | + | 5276811 - 5277143 | 12066.4 |
| fe-s cluster assembly protein iscx | IZT61_21520 | P44668 | + | 5277279 - 5277521 | 9808.32 |
| had-iiia family hydrolase | IZT61_21525 | P0ABZ5 | + | 5277777 - 5278304 | 19206.9 |
| hypothetical protein | IZT61_21530 | Not Available | + | 5278539 - 5278940 | 15169.4 |
| septum formation protein maf | IZT61_21535 | A5FFP4 | + | 5279013 - 5279573 | 21113.3 |
| exopolyphosphatase | IZT61_21540 | P44828 | - | 5279951 - 5280874 | 33563.7 |
| molecular chaperone dnaj | IZT61_21545 | Q5LED4 | - | 5281093 - 5282256 | 41520.2 |
| nucleotide exchange factor grpe | IZT61_21550 | Q8A8C4 | - | 5282428 - 5283009 | 21582.3 |
| atp-binding cassette domain-containing protein | IZT61_21555 | O34814 | - | 5283216 - 5283899 | 25153.7 |
| fructose-6-phosphate aldolase | IZT61_21560 | Not Available | - | 5283902 - 5284105 | 7835.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.