Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | IZT61_01810 | P45296 | - | 417679 - 418185 | 18497.2 |
| dna mismatch repair protein muts | IZT61_01815 | A6LG92 | - | 418251 - 420830 | 96609.0 |
| hpf/raia family ribosome-associated protein | IZT61_01820 | Not Available | + | 421219 - 421533 | 11561.9 |
| fic family protein | IZT61_01825 | A7SVT1 | - | 421633 - 422409 | 30197.0 |
| menaquinone biosynthesis protein | IZT61_01830 | Q9L0T8 | - | 422463 - 423188 | 27240.6 |
| histidine phosphatase family protein | IZT61_01835 | D3DFG8 | - | 423334 - 423957 | 23899.5 |
| pentapeptide repeat-containing protein | IZT61_01840 | Not Available | - | 423977 - 424108 | 4950.84 |
| aminofutalosine synthase mqne | IZT61_01845 | Q5SK48 | - | 424160 - 425353 | 46100.1 |
| lipocalin family protein | IZT61_01850 | Not Available | - | 425863 - 426309 | 15855.8 |
| aminotransferase class v-fold plp-dependent enzyme | IZT61_01855 | P66876 | + | 426481 - 427596 | 40665.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.