Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | IZT61_18315 | P0A2T7 | - | 4494103 - 4494702 | 22408.2 |
| had family hydrolase | IZT61_18320 | O59346 | + | 4494781 - 4495473 | 26256.8 |
| chloramphenicol acetyltransferase | IZT61_18325 | P00484 | + | 4495470 - 4496114 | 24496.0 |
| hypothetical protein | IZT61_18330 | Not Available | + | 4496149 - 4496355 | 7945.44 |
| Trna-ala | Not Available | Not Available | + | 4496505 - 4496578 | Not Available |
| duf3800 domain-containing protein | IZT61_18340 | Not Available | + | 4496774 - 4497526 | 29012.1 |
| helix-turn-helix transcriptional regulator | IZT61_18345 | P43465 | - | 4497917 - 4498807 | 34381.0 |
| aldo/keto reductase | IZT61_18350 | A2XRZ0 | - | 4498864 - 4499868 | 36770.3 |
| hypothetical protein | IZT61_18355 | Not Available | + | 4500191 - 4500685 | 18232.4 |
| hpp family protein | IZT61_18360 | Q55EF8 | + | 4500754 - 4501335 | 21390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.