Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylpyrophosphate synthetase | IZT61_01710 | Not Available | - | 398093 - 398401 | 11353.3 |
| yiid c-terminal domain-containing protein | IZT61_01715 | Not Available | + | 398482 - 398967 | 18899.0 |
| atp-binding protein | IZT61_01720 | Q4R3B7 | + | 398976 - 399608 | 23679.7 |
| mate family efflux transporter | IZT61_01725 | Q8UDF5 | + | 400054 - 401421 | 49413.8 |
| hypothetical protein | IZT61_01730 | Not Available | - | 401558 - 402019 | 16938.6 |
| hypothetical protein | IZT61_01735 | Not Available | - | 402063 - 402797 | 27189.5 |
| pseudouridylate synthase | IZT61_01740 | Q9KTL4 | - | 402837 - 403520 | 26175.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | IZT61_01745 | P77489 | - | 404172 - 406295 | 76310.5 |
| xanthine dehydrogenase family protein subunit m | IZT61_01750 | P77324 | - | 406298 - 407281 | 35318.0 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | IZT61_01755 | Q8X6I9 | - | 407278 - 407901 | 22169.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.