Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_01660 | Not Available | + | 381492 - 381659 | 6289.54 |
| malto-oligosyltrehalose trehalohydrolase | IZT61_01665 | Q55088 | + | 381786 - 383654 | 70616.8 |
| malto-oligosyltrehalose synthase | IZT61_01670 | P72785 | + | 383647 - 387696 | 154313.0 |
| duf3606 domain-containing protein | IZT61_01675 | Not Available | - | 387725 - 387922 | 7389.77 |
| pas domain s-box protein | IZT61_01680 | Q45614 | - | 388539 - 390275 | 65437.3 |
| hypothetical protein | IZT61_01685 | Not Available | - | 390765 - 391910 | 43278.3 |
| tetratricopeptide repeat protein | IZT61_01690 | Not Available | - | 392003 - 393091 | 40027.9 |
| dna gyrase subunit a | IZT61_01695 | P0C0R0 | - | 393117 - 395705 | 96983.1 |
| mfs transporter | IZT61_01700 | A8AQB4 | - | 396428 - 397660 | 44352.2 |
| coproporphyrinogen iii oxidase | IZT61_01705 | Not Available | - | 397764 - 397979 | 7377.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.