Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | IZT61_01310 | Q11UN5 | + | 298636 - 299241 | 22457.0 |
| pyridoxamine 5'-phosphate oxidase family protein | IZT61_01315 | Q01358 | + | 299296 - 299784 | 18321.7 |
| kynureninase | IZT61_01320 | A5FMM4 | + | 299850 - 301145 | 48678.2 |
| hypothetical protein | IZT61_01325 | Q8YSU5 | + | 301152 - 302015 | 33257.9 |
| histone deacetylase | IZT61_01330 | P28606 | + | 302012 - 302914 | 33658.2 |
| s8 family peptidase | IZT61_01335 | Q45670 | - | 303412 - 305004 | 57786.9 |
| tonb-dependent receptor | IZT61_01340 | Q47162 | - | 305142 - 307448 | 85697.4 |
| pepsy domain-containing protein | IZT61_01345 | Not Available | - | 307801 - 308964 | 44451.3 |
| tonb-dependent receptor | IZT61_01350 | A0A0H2ZI93 | - | 308968 - 311274 | 85253.8 |
| duf4142 domain-containing protein | IZT61_01355 | Not Available | - | 311779 - 312375 | 21511.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.