Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | IZT61_00810 | P42306 | + | 179655 - 180962 | 48408.2 |
| (fe-s)-binding protein | IZT61_00815 | Q5L300 | + | 180987 - 181724 | 27554.0 |
| hypothetical protein | IZT61_00820 | Not Available | + | 181846 - 182754 | 32849.5 |
| acyltransferase | IZT61_00825 | P29113 | + | 183282 - 184406 | 42406.2 |
| threonine--trna ligase | IZT61_00830 | Q11UK3 | + | 185193 - 187118 | 73131.3 |
| translation initiation factor if-3 | IZT61_00835 | A6L9S3 | + | 187136 - 187705 | 21479.3 |
| 50s ribosomal protein l35 | IZT61_00840 | A6L9S4 | + | 187735 - 187935 | 7255.12 |
| 50s ribosomal protein l20 | IZT61_00845 | A0LYZ0 | + | 188008 - 188352 | 12983.0 |
| yegp family protein | IZT61_00850 | O69049 | - | 189070 - 189399 | 11960.8 |
| 30s ribosomal protein s15 | IZT61_00855 | A0LYC2 | + | 189813 - 190097 | 10996.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.