Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | IZT61_00760 | H6LBS1 | + | 164108 - 165511 | 50926.3 |
| acyl-coa thioesterase | IZT61_00765 | P11469 | - | 165815 - 166300 | 18780.7 |
| hsp20/alpha crystallin family protein | IZT61_00770 | Q4UJB1 | + | 166369 - 166803 | 16446.2 |
| gxxexxy protein | IZT61_00775 | Not Available | + | 167204 - 167590 | 14797.0 |
| nicotinamide mononucleotide adenylyltransferase | IZT61_00780 | Not Available | + | 167742 - 169058 | 49616.3 |
| ld-carboxypeptidase | IZT61_00785 | O34851 | - | 169463 - 170482 | 37391.9 |
| radical sam protein | IZT61_00790 | O58549 | + | 170782 - 172989 | 84033.5 |
| hypothetical protein | IZT61_00795 | Not Available | - | 173190 - 173453 | 10046.0 |
| pd40 domain-containing protein | IZT61_00800 | A5D1A4 | - | 173861 - 177103 | 119872.0 |
| recq family atp-dependent dna helicase | IZT61_00805 | P71359 | + | 177591 - 179483 | 71867.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.