Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase/oxidase | IZT61_00560 | P90795 | - | 123383 - 124984 | 58798.6 |
| deor/glpr transcriptional regulator | IZT61_00565 | P0ACK4 | + | 125142 - 125906 | 27952.0 |
| response regulator transcription factor | IZT61_00570 | P37478 | + | 125949 - 126341 | 14851.8 |
| hypothetical protein | IZT61_00575 | Not Available | + | 126798 - 128255 | 54785.8 |
| hypothetical protein | IZT61_00580 | Not Available | + | 128259 - 128801 | 20471.6 |
| hypothetical protein | IZT61_00585 | Not Available | + | 128886 - 129332 | 17102.1 |
| hypothetical protein | IZT61_00590 | Not Available | + | 129496 - 130038 | 20739.0 |
| hypothetical protein | IZT61_00595 | Not Available | + | 130125 - 130571 | 17202.2 |
| Trna-ser | Not Available | Not Available | + | 130858 - 130945 | Not Available |
| yihy/virulence factor brkb family protein | IZT61_00605 | O34437 | - | 131042 - 132019 | 37095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.