Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trna epoxyqueuosine(34) reductase quegIZT61_05755E6X4P3+1425405 - 142634035303.2
duf2281 domain-containing proteinIZT61_05760Not Available+1426411 - 14266177761.31
dmt family transporterIZT61_05765Not Available+1426614 - 142700014534.5
m1 family metallopeptidaseIZT61_05770Not Available-1427198 - 142905770375.1
hypothetical proteinIZT61_05775Not Available-1429089 - 14293289235.16
dna polymerase iii subunit epsilonIZT61_05780Q8RA32-1429470 - 143043536860.1
duf3857 domain-containing proteinIZT61_05785Not Available+1430620 - 143259375171.7
duf3857 domain-containing proteinIZT61_05790Not Available+1432590 - 143449772254.8
murein l,d-transpeptidase catalytic domain family proteinIZT61_05795Not Available+1435254 - 143603928859.5
hypothetical proteinIZT61_05800Not Available-1436071 - 143651417277.1

Displaying genes 1151 – 1160 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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