Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_00510 | Not Available | + | 113756 - 114256 | 19287.4 |
| 50s ribosomal protein l21 | IZT61_00515 | A5FJP5 | + | 114717 - 115028 | 11384.9 |
| 50s ribosomal protein l27 | IZT61_00520 | Q11XX3 | + | 115079 - 115489 | 14332.2 |
| hypothetical protein | IZT61_00525 | Not Available | + | 115822 - 116136 | 11857.2 |
| hypothetical protein | IZT61_00530 | Not Available | + | 116294 - 116452 | 6001.04 |
| trna 2-thiouridine(34) synthase mnma | IZT61_00535 | Q11UP4 | - | 117158 - 118249 | 40421.1 |
| cbs domain-containing protein | IZT61_00540 | Q9FMV3 | - | 118355 - 120259 | 72793.6 |
| 3'-5' exonuclease | IZT61_00545 | P57337 | - | 120263 - 120925 | 25749.8 |
| aquaporin family protein | IZT61_00550 | Q9X1E3 | - | 121084 - 121821 | 25619.0 |
| glycerol kinase glpk | IZT61_00555 | Q7P1G2 | - | 121877 - 123367 | 54053.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.