Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| moad/this family protein | IZT61_05360 | Not Available | + | 1341341 - 1341574 | 8368.32 |
| thif family adenylyltransferase | IZT61_05365 | Q72J02 | + | 1341584 - 1342690 | 40550.5 |
| molybdenum cofactor biosynthesis protein moae | IZT61_05370 | O67928 | + | 1342690 - 1343136 | 16519.0 |
| bifunctional molybdenum cofactor biosynthesis protein moac/moab | IZT61_05375 | P59014 | + | 1343361 - 1344266 | 32478.6 |
| srpbcc family protein | IZT61_05380 | Not Available | + | 1344377 - 1344787 | 15625.9 |
| class i sam-dependent methyltransferase | IZT61_05385 | Q9WZL2 | + | 1346295 - 1347011 | 27905.4 |
| air synthase family protein | IZT61_05390 | Q58089 | + | 1347013 - 1348062 | 36773.2 |
| thiamine phosphate synthase | IZT61_05395 | Q3SFU7 | + | 1348053 - 1348703 | 23453.3 |
| hypothetical protein | IZT61_05400 | Not Available | + | 1348715 - 1348978 | 10242.4 |
| hypothetical protein | IZT61_05405 | Not Available | + | 1349135 - 1349305 | 6685.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.