Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | IZT61_05310 | Q32KH5 | - | 1332750 - 1334243 | 56842.2 |
| hypothetical protein | IZT61_05315 | Not Available | - | 1334703 - 1334993 | 10746.6 |
| hypothetical protein | IZT61_05320 | Not Available | - | 1335198 - 1335452 | 9089.99 |
| hypothetical protein | IZT61_05325 | Not Available | - | 1335608 - 1335862 | 9879.56 |
| twin-arginine translocase tata/tate family subunit | IZT61_05330 | A4SG03 | - | 1336069 - 1336266 | 6932.81 |
| response regulator | IZT61_05335 | P45605 | - | 1336794 - 1337156 | 13444.3 |
| xdhc family protein | IZT61_05340 | O32147 | + | 1337378 - 1338478 | 40179.5 |
| nucleotidyltransferase family protein | IZT61_05345 | Q93NF6 | + | 1338480 - 1339079 | 21295.6 |
| gtp 3',8-cyclase moaa | IZT61_05350 | Q9NZB8 | + | 1339072 - 1340052 | 36709.0 |
| molybdopterin molybdotransferase moea | IZT61_05355 | P45210 | + | 1340061 - 1341236 | 41810.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.