Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase | IZT61_00460 | Q7U2S5 | + | 102368 - 102832 | 17616.3 |
| acyl-coa carboxylase subunit beta | IZT61_00465 | I6YDK7 | + | 102990 - 104618 | 59216.6 |
| dipeptidase | IZT61_00470 | P31428 | + | 104850 - 106007 | 42071.9 |
| thioredoxin-disulfide reductase | IZT61_00475 | Q9KSS4 | + | 106316 - 107272 | 34298.6 |
| family 20 glycosylhydrolase | IZT61_00480 | P49008 | + | 107513 - 109411 | 70046.0 |
| diacylglycerol kinase family protein | IZT61_00485 | Q55143 | + | 109567 - 109950 | 13979.5 |
| duf922 domain-containing protein | IZT61_00490 | Not Available | - | 110294 - 110860 | 22012.1 |
| hypothetical protein | IZT61_00495 | Not Available | - | 110965 - 111570 | 23396.0 |
| rna polymerase sigma factor | IZT61_00500 | O07582 | - | 111557 - 112054 | 19345.2 |
| cation:dicarboxylase symporter family transporter | IZT61_00505 | P21345 | + | 112317 - 113759 | 52279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.