Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_04910 | Not Available | + | 1224649 - 1224855 | 8061.12 |
| recombinase family protein | IZT61_04915 | P07945 | + | 1224866 - 1226344 | 56996.1 |
| dmt family transporter | IZT61_04920 | P10427 | + | 1226689 - 1227144 | 17868.7 |
| Trna-his | Not Available | Not Available | + | 1228205 - 1228281 | Not Available |
| ribonuclease hi | IZT61_04930 | B7JVG1 | + | 1228458 - 1228931 | 17909.5 |
| class 1 fructose-bisphosphatase | IZT61_04935 | A4SM33 | - | 1228928 - 1230007 | 39398.4 |
| metallophosphoesterase family protein | IZT61_04940 | O27802 | - | 1230027 - 1230518 | 18425.2 |
| methyltransferase | IZT61_04945 | C6Y2G0 | - | 1230704 - 1231405 | 25893.1 |
| voc family protein | IZT61_04950 | P45871 | - | 1231402 - 1231788 | 14921.7 |
| hypothetical protein | IZT61_04955 | Not Available | + | 1231961 - 1232200 | 8995.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.