Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | IZT61_04860 | P42410 | - | 1217925 - 1218332 | 14619.9 |
| stas domain-containing protein | IZT61_04865 | P42409 | - | 1218335 - 1219204 | 31911.7 |
| hypothetical protein | IZT61_04870 | Not Available | - | 1219640 - 1219810 | 6630.59 |
| crp/fnr family transcriptional regulator | IZT61_04875 | Not Available | + | 1219942 - 1220502 | 21724.5 |
| hypothetical protein | IZT61_04880 | Not Available | + | 1220572 - 1221234 | 24648.9 |
| hypothetical protein | IZT61_04885 | Not Available | + | 1221535 - 1221840 | 11550.7 |
| hypothetical protein | IZT61_04890 | Not Available | - | 1221967 - 1222515 | 20291.7 |
| hypothetical protein | IZT61_04895 | Not Available | - | 1222527 - 1223252 | 26390.2 |
| hypothetical protein | IZT61_04900 | Not Available | + | 1223606 - 1223833 | 8173.14 |
| hypothetical protein | IZT61_04905 | Not Available | - | 1224139 - 1224459 | 12059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.