Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cofh family radical sam protein | IZT61_00410 | Q9K864 | - | 85932 - 87056 | 42066.5 |
| insulinase family protein | IZT61_00415 | O25656 | + | 87372 - 88616 | 47364.3 |
| insulinase family protein | IZT61_00420 | Q04805 | + | 88609 - 89880 | 48526.5 |
| hypothetical protein | IZT61_00425 | Not Available | - | 90353 - 90832 | 18204.5 |
| hypothetical protein | IZT61_00430 | Not Available | - | 90823 - 91284 | 17077.5 |
| duf3857 domain-containing protein | IZT61_00435 | Not Available | - | 91550 - 93445 | 71583.3 |
| duf3857 domain-containing protein | IZT61_00440 | Not Available | - | 93442 - 95448 | 77089.1 |
| imp dehydrogenase | IZT61_00445 | Q9KGN8 | + | 95826 - 97295 | 52343.6 |
| tonb-dependent receptor | IZT61_00450 | A1JTG3 | + | 98740 - 101319 | 93323.1 |
| tigr00730 family rossman fold protein | IZT61_00455 | P48636 | + | 101484 - 102077 | 21848.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.