Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | IZT61_04360 | P19593 | - | 1108057 - 1109724 | 64359.2 |
| hypothetical protein | IZT61_04365 | Not Available | - | 1110310 - 1111059 | 28252.1 |
| duf4138 domain-containing protein | IZT61_04370 | Not Available | - | 1111069 - 1111908 | 30701.5 |
| conjugative transposon protein tram | IZT61_04375 | Not Available | - | 1111914 - 1113140 | 45371.3 |
| hypothetical protein | IZT61_04380 | Not Available | - | 1113144 - 1113533 | 14447.0 |
| conjugative transposon protein trak | IZT61_04385 | Not Available | - | 1113530 - 1114153 | 23781.6 |
| plasmid transfer protein | IZT61_04390 | Not Available | - | 1114158 - 1115285 | 41838.1 |
| hypothetical protein | IZT61_04395 | Not Available | - | 1115289 - 1116062 | 29485.6 |
| hypothetical protein | IZT61_04400 | Not Available | - | 1116059 - 1116694 | 23717.1 |
| hypothetical protein | IZT61_04405 | Not Available | + | 1116782 - 1117393 | 24042.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.