Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_04310 | Not Available | - | 1099692 - 1100381 | 25706.4 |
| hypothetical protein | IZT61_04315 | Not Available | - | 1100392 - 1101066 | 24947.9 |
| hypothetical protein | IZT61_04320 | Not Available | - | 1101675 - 1101875 | 7759.45 |
| hypothetical protein | IZT61_04325 | Not Available | - | 1101899 - 1102762 | 32828.8 |
| hypothetical protein | IZT61_04330 | Not Available | - | 1102778 - 1103095 | 12012.2 |
| duf4099 domain-containing protein | IZT61_04335 | Not Available | - | 1103559 - 1104359 | 29459.2 |
| duf1738 domain-containing protein | IZT61_04340 | P27189 | - | 1104369 - 1105583 | 46068.0 |
| m23 family metallopeptidase | IZT61_04345 | Q8K9M4 | - | 1105576 - 1106103 | 19776.8 |
| hypothetical protein | IZT61_04350 | Not Available | - | 1106183 - 1106605 | 15539.7 |
| dmt family transporter | IZT61_04355 | Not Available | - | 1106636 - 1107949 | 48723.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.