Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_03360 | Not Available | + | 830140 - 830523 | 14678.4 |
| hypothetical protein | IZT61_03365 | Not Available | + | 830540 - 831001 | 17403.9 |
| outer membrane beta-barrel protein | IZT61_03370 | Not Available | + | 831430 - 834204 | 102924.0 |
| glpgli family protein | IZT61_03375 | Not Available | + | 834209 - 834967 | 29041.2 |
| ctp synthase | IZT61_03380 | Q11S24 | + | 835150 - 836766 | 59902.3 |
| membrane protein insertase yidc | IZT61_03385 | A6L9D2 | + | 836788 - 838578 | 67596.2 |
| s9 family peptidase | IZT61_03390 | B2RIT0 | + | 839969 - 842827 | 107366.0 |
| hypothetical protein | IZT61_03395 | Not Available | + | 842955 - 843467 | 18832.8 |
| spore maturation protein | IZT61_03400 | P35158 | + | 843970 - 845241 | 45246.6 |
| hypothetical protein | IZT61_03405 | Not Available | - | 845511 - 845753 | 9340.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.