Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside permease | IZT61_03210 | P0AFF4 | + | 799600 - 800985 | 52053.3 |
| duf3667 domain-containing protein | IZT61_03215 | Not Available | + | 801006 - 802124 | 43466.2 |
| citrate synthase | IZT61_03220 | P9WPD4 | - | 802380 - 803669 | 48493.4 |
| duf3347 domain-containing protein | IZT61_03225 | Not Available | - | 803800 - 804327 | 18766.4 |
| hypothetical protein | IZT61_03230 | Not Available | - | 804424 - 804972 | 19473.3 |
| hypothetical protein | IZT61_03235 | Not Available | - | 805123 - 805638 | 17843.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | IZT61_03240 | Q5LGQ7 | - | 805765 - 806685 | 35283.8 |
| hypothetical protein | IZT61_03245 | Not Available | - | 806687 - 807475 | 29774.0 |
| hypothetical protein | IZT61_03250 | Not Available | - | 807531 - 807893 | 13803.1 |
| mbl fold metallo-hydrolase | IZT61_03255 | P9WKP2 | - | 807940 - 809034 | 41349.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.