Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | IZT61_03010 | P77712 | + | 755300 - 755719 | 16262.6 |
| mate family efflux transporter | IZT61_03015 | Q58119 | + | 755957 - 757381 | 50598.5 |
| tcr/tet family mfs transporter | IZT61_03020 | P02982 | + | 757419 - 758630 | 43401.8 |
| phoh family protein | IZT61_03025 | O07635 | - | 759304 - 760653 | 50470.1 |
| fusc family protein | IZT61_03030 | P44289 | + | 761431 - 763590 | 82634.1 |
| hypothetical protein | IZT61_03035 | Not Available | - | 763560 - 764024 | 17759.2 |
| porp/sprf family type ix secretion system membrane protein | IZT61_03040 | Not Available | - | 764028 - 765026 | 37516.1 |
| gliding motility-associated c-terminal domain-containing protein | IZT61_03045 | Not Available | - | 765026 - 767443 | 88605.2 |
| organic hydroperoxide resistance protein | IZT61_03050 | P70736 | + | 767798 - 768208 | 14018.5 |
| biotin synthase biob | IZT61_03055 | Q11S94 | - | 768302 - 769303 | 37348.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.