Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| had family phosphatase | IZT61_02960 | P44004 | + | 747835 - 748506 | 25211.1 |
| nudix hydrolase | IZT61_02965 | Q58549 | + | 748509 - 749207 | 26892.7 |
| Trna-lys | Not Available | Not Available | + | 749373 - 749445 | Not Available |
| polysaccharide biosynthesis protein | IZT61_02975 | P71052 | + | 749944 - 751368 | 53441.5 |
| m67 family metallopeptidase | IZT61_02980 | Q8U1Y4 | + | 751352 - 751762 | 15245.0 |
| moad/this family protein | IZT61_02985 | P74060 | + | 751765 - 752049 | 10352.4 |
| thif family adenylyltransferase | IZT61_02990 | P9WMN6 | + | 752052 - 753194 | 41796.6 |
| beta-lactamase family protein | IZT61_02995 | Q6G6M9 | - | 753232 - 754386 | 42809.2 |
| voc family protein | IZT61_03000 | Q8Y6I2 | - | 754451 - 754855 | 15175.8 |
| hypothetical protein | IZT61_03005 | Not Available | - | 754959 - 755219 | 10101.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.