Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_02760 | Not Available | + | 673748 - 674404 | 24960.9 |
| alpha-rhamnosidase | IZT61_02765 | P9WF03 | - | 674836 - 677001 | 82239.5 |
| sodium/solute symporter | IZT61_02770 | A8WHP3 | - | 677238 - 678833 | 58700.5 |
| gfo/idh/moca family oxidoreductase | IZT61_02775 | Q05184 | - | 678997 - 680082 | 41023.0 |
| right-handed parallel beta-helix repeat-containing protein | IZT61_02780 | Q556R9 | - | 680182 - 682683 | 94130.8 |
| sugar phosphate isomerase/epimerase | IZT61_02785 | Q8RMD1 | - | 682836 - 683738 | 33540.0 |
| acetylxylan esterase | IZT61_02790 | Not Available | - | 683891 - 685291 | 52794.7 |
| exo-alpha-sialidase | IZT61_02795 | Q27701 | - | 685486 - 686613 | 41280.5 |
| duf3826 domain-containing protein | IZT61_02800 | Not Available | - | 686863 - 687498 | 23509.2 |
| family 78 glycoside hydrolase catalytic domain | IZT61_02805 | T2KNB2 | - | 687918 - 690647 | 104025.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.