Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding alcohol dehydrogenase family protein | IZT61_02660 | P39400 | - | 639853 - 640872 | 37196.8 |
| sdr family oxidoreductase | IZT61_02665 | Q9WYG0 | - | 641053 - 641841 | 28292.8 |
| hypothetical protein | IZT61_02670 | Not Available | - | 642007 - 644373 | 90059.2 |
| sialate o-acetylesterase | IZT61_02675 | P70665 | - | 644548 - 645975 | 52353.3 |
| glycoside hydrolase family 127 protein | IZT61_02680 | E8MGH8 | - | 646062 - 648083 | 75225.9 |
| dna-binding protein | IZT61_02685 | T2KNA8 | - | 648348 - 651776 | 127858.0 |
| l-fucose:h+ symporter permease | IZT61_02690 | P11551 | - | 651776 - 653068 | 46573.9 |
| dehydratase | IZT61_02695 | P77455 | - | 653528 - 653971 | 16682.0 |
| gfo/idh/moca family oxidoreductase | IZT61_02700 | B9JK80 | - | 654100 - 655182 | 40159.5 |
| extracellular solute-binding protein | IZT61_02705 | Q9RUE8 | - | 655179 - 656417 | 46859.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.