Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | IZT61_02560 | Not Available | - | 617698 - 618360 | 23580.2 |
| hypothetical protein | IZT61_02565 | Not Available | + | 618508 - 618825 | 11853.2 |
| ion transporter | IZT61_02570 | Q9H3M0 | - | 618897 - 619721 | 30701.3 |
| glucose 1-dehydrogenase | IZT61_02575 | O07575 | - | 619758 - 620609 | 30590.0 |
| hypothetical protein | IZT61_02580 | Not Available | + | 620704 - 620955 | 9819.77 |
| duf481 domain-containing protein | IZT61_02585 | Not Available | + | 621015 - 621731 | 27585.6 |
| hypothetical protein | IZT61_02590 | Not Available | + | 621879 - 622088 | 7816.33 |
| duf4142 domain-containing protein | IZT61_02595 | Not Available | + | 622563 - 623150 | 20806.8 |
| response regulator | IZT61_02600 | Q82Z76 | - | 623211 - 623573 | 13899.1 |
| competence protein | IZT61_02605 | Not Available | - | 623661 - 624305 | 25574.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.