Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | IZT61_02360 | Not Available | - | 557283 - 558575 | 46954.3 |
| duf11 domain-containing protein | IZT61_02365 | Not Available | - | 558586 - 561156 | 91293.5 |
| hypothetical protein | IZT61_02370 | Not Available | - | 561164 - 564718 | 122789.0 |
| crp/fnr family transcriptional regulator | IZT61_02375 | Not Available | - | 565183 - 565797 | 24105.2 |
| tigr02757 family protein | IZT61_02380 | Not Available | - | 565919 - 566770 | 32556.9 |
| cystathionine gamma-synthase | IZT61_02385 | Q83A83 | - | 566890 - 568035 | 42295.6 |
| proline--trna ligase | IZT61_02390 | A5FA31 | - | 568126 - 569598 | 55730.8 |
| hypothetical protein | IZT61_02395 | Not Available | + | 569797 - 570762 | 34916.3 |
| outer membrane protein transport protein | IZT61_02400 | Not Available | + | 570788 - 572299 | 55017.6 |
| thiol-activated cytolysin family protein | IZT61_02405 | P31830 | - | 572367 - 573569 | 43404.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.