Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide mfs transporter | IZT61_02310 | P94408 | + | 542946 - 544505 | 57492.6 |
| peptide mfs transporter | IZT61_02315 | P94408 | + | 544507 - 546000 | 55872.4 |
| polyprenol monophosphomannose synthase | IZT61_02320 | A0QZ12 | + | 546457 - 547197 | 28252.5 |
| duf1905 domain-containing protein | IZT61_02325 | Not Available | - | 547278 - 547793 | 19462.9 |
| dna polymerase iii subunit alpha | IZT61_02330 | Q9CI70 | - | 547866 - 550880 | 116622.0 |
| dna polymerase iv | IZT61_02335 | Q3ABL2 | - | 550961 - 552232 | 47860.2 |
| ompa family protein | IZT61_02340 | Q7NFT5 | - | 553046 - 555007 | 73088.1 |
| hypothetical protein | IZT61_02345 | Not Available | + | 555334 - 555519 | 6351.06 |
| response regulator transcription factor | IZT61_02350 | P32967 | - | 555534 - 556181 | 23889.2 |
| type ix secretion system membrane protein porp/sprf | IZT61_02355 | Not Available | - | 556303 - 557274 | 35424.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.