Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_02260 | B0K2C2 | - | 534639 - 535748 | 41096.0 |
| Trna-pro | Not Available | Not Available | + | 536097 - 536170 | Not Available |
| Trna-pro | Not Available | Not Available | + | 536223 - 536299 | Not Available |
| Trna-ser | Not Available | Not Available | + | 536398 - 536484 | Not Available |
| hdig domain-containing protein | IZT61_02280 | P46344 | - | 536565 - 538571 | 76937.7 |
| spfh domain-containing protein | IZT61_02285 | Not Available | + | 538894 - 539751 | 31401.1 |
| hypothetical protein | IZT61_02290 | Not Available | + | 539753 - 540271 | 20097.9 |
| arc family dna binding domain-containing protein | IZT61_02295 | Not Available | + | 540273 - 540467 | 7425.84 |
| acetyl-coa c-acyltransferase | IZT61_02300 | Q9UQW6 | + | 540659 - 541834 | 40923.9 |
| hypothetical protein | IZT61_02305 | Not Available | + | 541909 - 542799 | 33605.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.