Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3140 domain-containing protein | IZT61_02210 | Not Available | - | 520843 - 521181 | 12943.0 |
| hypothetical protein | IZT61_02215 | Not Available | + | 521800 - 522483 | 24647.0 |
| hypothetical protein | IZT61_02220 | Not Available | + | 522624 - 522869 | 9414.25 |
| ribulokinase | IZT61_02225 | Q87FK5 | + | 523536 - 525236 | 62038.4 |
| l-ribulose-5-phosphate 4-epimerase | IZT61_02230 | P08203 | + | 525233 - 525934 | 25798.6 |
| l-arabinose isomerase | IZT61_02235 | A9B689 | + | 526517 - 528007 | 55226.7 |
| glycoside hydrolase family 125 protein | IZT61_02240 | Q10449 | - | 528705 - 530129 | 53424.6 |
| hypothetical protein | IZT61_02245 | Not Available | + | 530549 - 530752 | 7874.93 |
| gh92 family glycosyl hydrolase | IZT61_02250 | O86365 | - | 530769 - 533024 | 84976.8 |
| sugar mfs transporter | IZT61_02255 | P11551 | - | 533320 - 534546 | 44607.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.