Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | IZT61_22115 | Q9I2S7 | + | 5414243 - 5416999 | 105033.0 |
| biotin carboxylase | IZT61_22120 | Not Available | + | 5417023 - 5418528 | 57430.6 |
| hypothetical protein | IZT61_22125 | Not Available | + | 5418531 - 5419526 | 38373.7 |
| aldehyde dehydrogenase family protein | IZT61_22130 | A6UVT6 | + | 5419664 - 5421094 | 51979.8 |
| glycoside hydrolase family protein | IZT61_22135 | Not Available | - | 5421369 - 5422436 | 40042.1 |
| hypothetical protein | IZT61_22140 | Not Available | - | 5422496 - 5422681 | 6954.35 |
| sodium:proton antiporter | IZT61_22145 | G3XD29 | - | 5422751 - 5423974 | 45050.9 |
| hypothetical protein | IZT61_22150 | Not Available | - | 5424378 - 5424836 | 17478.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.