Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eve domain-containing protein | IZT61_22015 | Q91YJ3 | + | 5393835 - 5394239 | 15445.3 |
| hypothetical protein | IZT61_22020 | Not Available | + | 5394341 - 5394928 | 22518.5 |
| hypothetical protein | IZT61_22025 | Not Available | + | 5394987 - 5395550 | 20718.2 |
| sodium:proton antiporter | IZT61_22030 | Not Available | - | 5395540 - 5396727 | 43636.9 |
| acyl-coa thioesterase | IZT61_22035 | O84540 | - | 5396794 - 5397315 | 19453.6 |
| alpha-amylase | IZT61_22040 | P26612 | + | 5397475 - 5398962 | 57156.5 |
| tim barrel protein | IZT61_22045 | P30147 | - | 5399446 - 5400375 | 34730.5 |
| fad:protein fmn transferase | IZT61_22050 | A5F5Y3 | - | 5400473 - 5401465 | 36490.1 |
| gfo/idh/moca family oxidoreductase | IZT61_22055 | O68965 | - | 5401472 - 5402791 | 48739.6 |
| sumf1/egtb/pvdo family nonheme iron enzyme | IZT61_22060 | Q9PKP3 | - | 5402817 - 5403782 | 36642.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.