Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 c-terminal domain-containing protein | IZT61_02160 | Q56078 | - | 505013 - 507208 | 81242.2 |
| hypothetical protein | IZT61_02165 | Q3UPY5 | - | 507214 - 507981 | 29180.2 |
| beta-glucuronidase | IZT61_02170 | Q56307 | - | 507994 - 510720 | 104496.0 |
| beta galactosidase jelly roll domain-containing protein | IZT61_02175 | T2KPJ7 | - | 510914 - 512695 | 68800.0 |
| dmt family transporter | IZT61_02180 | Q8A6L0 | - | 512708 - 514695 | 73456.9 |
| alpha-galactosidase | IZT61_02185 | P16551 | - | 514704 - 516770 | 78599.4 |
| duf4832 domain-containing protein | IZT61_02190 | Not Available | - | 516798 - 518396 | 61308.5 |
| duf305 domain-containing protein | IZT61_02195 | Q5UPL7 | + | 519012 - 519464 | 17148.9 |
| dihydrofolate reductase family protein | IZT61_02200 | P37508 | + | 519622 - 520191 | 20778.9 |
| voc family protein | IZT61_02205 | Not Available | - | 520277 - 520729 | 16343.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.