Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfatase-like hydrolase/transferase | IZT61_21665 | Q8XNV1 | - | 5309878 - 5311356 | 55526.7 |
| hypothetical protein | IZT61_21670 | Not Available | - | 5311965 - 5312492 | 20237.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | IZT61_21675 | A6H1H2 | - | 5312492 - 5314012 | 55457.5 |
| duf4783 domain-containing protein | IZT61_21680 | Not Available | + | 5314186 - 5314584 | 15133.2 |
| carboxylating nicotinate-nucleotide diphosphorylase | IZT61_21685 | P77938 | + | 5315272 - 5316114 | 30291.8 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | IZT61_21690 | Q834K7 | + | 5316164 - 5316811 | 23197.1 |
| m48 family metallopeptidase | IZT61_21695 | Q9P7G4 | + | 5316900 - 5317703 | 28825.5 |
| chorismate-binding protein | IZT61_21700 | P05041 | - | 5317996 - 5319252 | 47562.4 |
| type ii toxin-antitoxin system rele/pare family toxin | IZT61_21705 | Not Available | - | 5319813 - 5320115 | 12022.4 |
| hypothetical protein | IZT61_21710 | Not Available | - | 5320112 - 5320339 | 8662.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.